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Project:Zebrafish Somitogenesis Deterministic Model, 2013Git repository (private as of June, 2013):https://github.com/aylab/sogen-deterministicAuthors:Ahmet Ay, Jack Holland, Adriana Sperlea, Sebastian Sangervasi**sampling code.Description:This directory contains the code used for sampling parameter sets for the deterministic model. The code uses Latin Hypercube Sampling.The sampling program borrows an implementation of Improved Hypercube Sampling from John Burkardt:ihs.cppihs.hppThe above code was made available by GNU LGPL licencse on J Burkardt's website. This code has not been changed from its original state. (7/1/2013)

Usage:Command-line arguments: [-option [value]]. . . [--option [value]]. . .-a, --sim-args [arguments] : INCLUDING THIS WILL PASS ALL SUCCEEDING ARGUMENTS TO THE SIMULATION PROGRAM.
-e, --exec [path] : The path of the executable that should run simulations of parameter sets. Default is './deterministic '.
-r, --ranges-file [filename] : The .ranges file from which the ranges to sample from will be taken. Default is 'sampleData/initial.ranges'.
-o, --output-file [filename] : The .params file to which the output of the sampling will be written. Default is 'sampleData/initial.params'.
-c, --cubes-file [filename] : The .cubes file to which the successful ranges will be written. Default is 'sampleData/initial.cubes '.
-m, --segments-file [filename] : The .segments file to which the indicies of the IHS-chosen segments (hypercubes) can be written. Default is 'sampleData/initial.segments '.
-d, --duplication-factor [int] : Duplication factor. A positive, non-zero integer. More duplication means more attempts at well-distributed LHS, but also means more time+memory used.
-n, --segments-number [int] : Number of segments (hypercubes) that should be chosen from the parameter space. This is equivalent to the number of points you would like to sample. n' ;-l, --lhs-runs [int] : Number of times you would like run the hypercube sampling. While the number of segments determines how many cubes are in the space, the number of runs determines how many times to resample from the same space.
-s, --random-seed [int] : Seed for random number generator, a postivite non-zero integer. If unset, a seed will be generated based on system time. Set this value to get the same output from multiple runs of the program
-p, --processes [int] : For parallelizing, this specifies how many processes the simulation should be spread accross. Default is 1, which is just serial simulation.
-D, --recursion-depth [int] : How deep the program should recurse looking for parameter sets. The range of the resulting values will be (ranges)*n^D.
-M, --mutant-threshold [float] : Percentage of mutants which must pass for a cube to be considered valid.
-C, --cube-threshold [float] : Percentage of cubes (ranges) within a space that must pass the mutant threshold to make that space valid.-b, --take-best : Including this will cause the simulation to analyze the best cube found when no cube in the space passed the mutant threshold. Disabled by default.
-i, --increase-threshold : Including this will increase the threshold for how many mutants have to pass (-M) at each depth of the recursive search. Disabled by default.
-w, --write-segments : Including this will enable writing the segment selections to a file. Automatically activated if a --segments-file is used.
-q, --quiet : Turn off printing messages to standard output (for sampling program only). Disabled by default.
-h, --help : This help menu.
Example: ./ihsample -r data.ranges -o data.params --segments-number 10 -p 4 -M .70 -i -random-seed 314 -C .66 --sim-args -q

Latin Hypercube Sampling Software Mac Download

These release notes describe version 2.1.0 of the OpenStudio software suite developed by the National Renewable Energy Laboratory (NREL), Buildings and Thermal Systems, Commercial Buildings Research Group, Tools Development Section, and associated collaborators. The notes are organized into the following sections:

  • Where to Find OpenStudio Documentation
  • Installation Notes
  • Overview

Where to Find OpenStudio Documentation

  • OpenStudio release documentation, including these release notes, tutorials, and other user documentation, is available at https://www.openstudio.net/.
  • C++ API documentation is available at https://openstudio-sdk-documentation.s3.amazonaws.com/index.html.
  • Measure development documentation is available at http://nrel.github.io/OpenStudio-user-documentation/reference/measure_writing_guide/.

Installation Notes

Latin hypercube sampling (program user's guide) (SAND) [Ronald L Iman] on Amazon.com. *FREE* shipping on qualifying offers. Latin Hypercube Sampling for uncertainty analysis - Free. A software of the LHS and standard random sampling based on the above mentioned procedure is. Latin Hypercube Sampling How Latin Hypercube compares to standard random sampling. Structured Data LLC is a software services and consulting firm founded in 2005. Most risk analysis simulation software products offer Latin Hypercube Sampling (LHS). It is a method for ensuring that each probability distribution in your model is evenly sampled. The technique dates back to 1980.

Latin Hypercube Sampling (LHS) is a method of sampling a model input space, usually for obtaining data for training metamodels or for uncertainty analysis.LHS typically requires less samples and converges faster than Monte Carlo Simple Random Sampling (MCSRS) methods when used in uncertainty analysis. Explore 14 apps like RiskAMP, all suggested and ranked by the AlternativeTo user community. Toggle navigation Mac. Free download, review of Latin Hypercube Sampling 1.0 (Budiman Minasny). Correlation among variables can be sprecified. Software Library Script Library Code Library ASP ASP.NET C/C++ CGI/PERL Flash Java PHP Python. Real-time latin-hypercube sampling-based Monte Carlo ERror Propagation - tisimst/mcerp. Skip to content. Join GitHub today. GitHub is home to over 28 million developers working together to host and review code, manage projects, and build software together.

OpenStudio is supported on Windows 7 – 10, OS X 10.10 – 10.11, and 64-bit Ubuntu 14.04.

OpenStudio 2.1.0 supports EnergyPlus Release 8.7.0, which is bundled with the OpenStudio installer. It is no longer necessary to download and install EnergyPlus separately. Other builds of EnergyPlus are not supported by OpenStudio 2.1.0.

OpenStudio 2.1.0 supports Radiance 5.0.a.12, which is bundled with the OpenStudio installer; users no longer have to install Radiance separately, and OpenStudio will use the included Radiance version regardless of any other versions that may be installed on the system. Other builds of Radiance are not supported by OpenStudio 2.1.0.

Installation Steps

  • The OpenStudio SketchUp Plug-in requires SketchUp 2017 (not available for Linux). The OpenStudio SketchUp Plug-in does not support older versions of SketchUp.
    • If the OpenStudio Plug-in does not automatically load in SketchUp, open the Window->Preferences->Extensions window in SketchUp and enable the OpenStudio plug-in if it is listed.
  • Download and install OpenStudio.
  • Setup a Building Component Library (BCL) account to access online building components and measures. View instructions on how to setup your account and configure the key in OpenStudio.

Overview

The OpenStudio 2.x line is an aggressive overhaul of OpenStudio to make the SDK smaller and more accessible for third party software developers. The new package includes two major new components: a command line interface (CLI) and a new version of the Parametric Analysis Tool (PAT). A new component based installer gives users the choice to install only the components that they need. OpenStudio 2.1.0 is the first major release of the OpenStudio 2.x line.

The OpenStudio command line interface (CLI) allows software developers to execute a series of OpenStudio Measures and other simulation steps as described in an OpenStudio Workflow (OSW) file. The OSW defines a set of paths to search for OpenStudio Measures, initial seed model, weather file, and other supporting files. When an OSW is run through the CLI, the initial seed model is loaded and OpenStudio Model Measures are applied to the seed model. After these measures, the OpenStudio Model is translated to EnergyPlus IDF format. Once in EnergyPlus IDF format, OpenStudio EnergyPlus Measures are applied. After these measures, the EnergyPlus simulation is executed. Once the EnergyPlus simulation is complete, OpenStudio Reporting Measures are applied which generate reports. Once the workflow is completed (successfully or unsuccessfully), an output OSW file is written which contains output related to running the workflow. The OpenStudio CLI contains a Ruby interpreter, Ruby standard library, OpenStudio Ruby bindings, and a core set of gems (including the OpenStudio Standards Gem). It does not have any shared library dependencies outside of system runtime libraries. EnergyPlus and Radiance are not embedded within the CLI, they are included as part of the OpenStudio installation. There is an example OSW included in this package in the compact_osw directory under the Examples directory. This example contains everything to run a simple OpenStudio workflow from loading a seed model, applying measures, running EnergyPlus, and running reporting measures. To run this example:

More information about the OpenStudio CLI is available at: http://nrel.github.io/OpenStudio-user-documentation/reference/command_line_interface/

A new version of the OpenStudio Parametric Analysis Tool (PAT) is part of OpenStudio 2.1.0 packages. This new version of PAT has been rewritten from the ground up as an example of JavaScript application development with OpenStudio. It has been packaged as an Electron desktop application and leverages OpenStudio Server for improved robustness, scalability, and capability. This new version of PAT provides similar functionality (and we hope improved usability) as compared to PAT 1.14.0. However, the new version of PAT is not backwards compatible with PAT 1.14.0 projects. Additionally, this new version of PAT supports “algorithmic” workflows – methods for automatically generating large sets of analysis data points. Choose from Design Of Experiments, Latin Hypercube Sampling, multiple optimization methods, and more to identify the most sensitive parameters in a model, calibrate a model against real consumption data, or optimize a model to balance multiple design objectives. Algorithmic analyses tend to be computationally intensive, so the new PAT supports simulation on Amazon Web Service or other resources provisioned with OpenStudio Server.

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The Radiance functionality (Radiance Daylighting Measure) has been updated to work with OpenStudio 2.x, including the OS Application, PAT, and Server. The measure has been relocated to the Building Component Library, but its operation remains the same. The measure is also backward compatible to OpenStudio v1.14.

The Ruby and C# binding footprints have been greatly reduced in the OpenStudio 2.1.0 package. Previously, deploying the Ruby and C# bindings required deployment of many shared library and file dependencies. In OpenStudio 2.1.0, the Ruby bindings are contained in a single openstudio.so (.bundle on Mac) file and the C# bindings in an OpenStudio.dll and two supporting dll files. These are the only files required to distribute the OpenStudio 2.1.0 bindings with a third party application. Note that the openstudio.so Ruby file does not contain any gems or the Ruby standard library; these must be configured using typical Gemfile configuration for your Ruby project. Similarly, the C# bindings do not include a Ruby interpreter or OpenStudio Ruby bindings needed to apply OpenStudio Measures. If a C# project desires to run measures or simulations, it can write an OSW file and make a system call to the CLI.

OpenStudio 2.1.0 is mostly backwards compatible with OpenStudio 1.1.4. One primary difference is that PAT is not backwards compatible with PAT 1.1.4 projects. Also, upgrading a 1.1.4 version OSM to 2.1.0 will not preserve the associated run.db, any measures associated with the OSM will have to be re-added in 2.1.0. The API for OpenStudio Model and other core namespaces was mostly preserved during the OpenStudio 2.1.0 conversion. However, the RunManager, Analysis, Project, and AnalysisDriver namespaces were completely removed. The CLI and OSW format replace the functionality of RunManager. The OpenStudio Analysis (OSA) format replaces the functionality of Analysis, Project, and AnalysisDriver. The Ruleset namespace has been renamed to Measure to better reflect its functionality.

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OpenStudio 2.1.0 has been updated to EnergyPlus 8.7, Ruby 2.2.4, and is compatible with SketchUp 2017. ResultsViewer is included in the 2.1.0 release.

Known Issues

This is a list of known issues, if you find an issue not on this list please let us know so we can fix it.

Installer

Mac
  • Spaces in the install path will cause PAT to fail.
  • Firewall rules are not configured at install time, user is prompted to allow http communication between OpenStudioApp and the CLI as well as between PAT and the CLI.

Measures

  • Measures written for OpenStudio 1.14.0 and earlier may not work with OpenStudio 2.0.0, measure authors are encouraged to test their measures and update them to ensure compatibility.
  • Reporting measures do not have access to offline JavaScript libraries included with the OpenStudio installation. Measure writers can include offline JavaScript libraries in the resources directory of their measure.

OpenStudioApp

  • The app may appear to freeze on return from BCL measure dialog on Mac, a workaround is to select File -> Quit and when prompted to save the Model, select cancel to abort the quit operation or press the escape key.
  • Using the file menu very quickly after launching OpenStudio may cause a crash if the OpenStudio Results measure has not been downloaded on Mac. Wait until the vertical tabs are re-enabled before using the file menus.

Latin Hypercube Sampling Method

PAT

Monte Carlo Simulation

  • “Create One Design Alternative with Each Measure Option” duplicates options that already exist
  • Cannot enter user defined string for Measure Choice arguments
  • Display name is not shown when browsing measures
  • Measures associated with seed model are not imported

Latin Hypercube Sampling Software Mac

Issue Statistics Since Previous Release

Latin Hypercube Sampling Algorithm

  • 103 new issues were filed since the 1.14.0 release of OpenStudio (not including opened pull requests).
  • 87 issues were closed since the 1.14.0 release of OpenStudio (not including closed pull requests).
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